Esther Julien, also see OPTIMAL

Yukihiro Murakami, On Phylogenetic Encodings and Orchard Networks

Remie Janssen, Rearranging Phylogenetic Networks

Teun Janssen, Optimization in the Photolithography Bay: Scheduling and the Traveling Salesman Problem


Hans Keur, Creating phylogenetic networks from clusters

Robbert Huijsman, Treewidth based algorithms for Tree Containment in phylogenetics

Susan Veldkamp, A MaxSAT Approach to Solving Frequency Conflicts within Cyclic Train Timetables

Frank van der Made, Box set optimization for e-commerce warehouses: Applied to

Leonie Nipius, Encoding undirected and semi-directed binary phylogenetic networks by quarnets

Teun Druijf, Optimizing Shunting Operations: A case-study at Kijfhoek shunting yard. Awarded Best Thesis for Applied Math Award 2022

Myrte van Belkom, Exploring deep learning to improve allelic peak calling in forensic DNA analysis

Alexandre Simon, Algorithmic study of 2-interval graphs

Frank Janisse, Encoding level-k phylogenetic networks

Simon van Oosterom, Investment Optimized Airport Infrastructure for Battery and Hydrogen Canister Swaps

Rosanne Wallin, Applicability of phylogenetic network algorithms for representing the evolutionary history of SARS-CoV-2 (blog post)

Jasper van Bemmelen, Reconstructing tree-child networks from their exhibited trinets

Bryan Versendaal, Improving algorithms in phylogenetics using machine learning

Sjors Kole, Constructing level-2 phylogenetic networks from trinets (software)

Sander Borst, New FPT algorithms for finding the temporal hybridization number for sets of phylogenetic trees (software)

Mick van Dijk, Classifying Candida species using Mixed Integer Optimization based optimal classification trees

Céline Swennenhuis, Parallel Machine Scheduling: with Partition Constraints

Erica van der Sar, Multi-attribute vehicle routing problems: Exploring the limits of exact methods in practice


Margot van de Klok, A new polynomial for describing Phylogenetic Networks

Merel Susanna, Making phylogenetic networks orchard: Algorithms to determine if a phylogenetic network is orchard and to transform non-orchard to orchard networks

Elise Deen, Different reduction rules for the Maximum Parsimony distance on phylogenetic trees

Riche Mol, Reconstruction of Phylogenetic Networks: An algorithm for deconstructing and reconstructing Level-2 Binary Networks based on their distances

Selma Husanović, Tail move rearrangement algorithm for rooted binary phylogenetic networks

Leonie Nipius, Rooted binary level-3 phylogenetic networks are encoded by quarnets

Maaike Elgersma, Preventing overfitting in Mixed Integer Optimization based classification tree construction

Robbert Huijsman, Tree-child Network Containment

Esmay Verzijlbergen, Orienting phylogenetic networks

Bram van den Heuvel, Multi-robot parcel sorting systems: Allocation and path finding

Arthur Mooiman, Computing Measures for Tree-Basedness of Phylogenetic Networks

Noortje Bonenkamp, Resource-constrained Machine Scheduling

Frank Janisse, Measuring how far a nonbinary phylogenetic network is from being tree-based

Niels Jonkman, Parental Parsimony on Phylogenetic Networks: Computing the Maximum Parsimony Scores of Phylogenetic Networks

Margot van Aken, De afstand tussen ongewortelde fylogenetische bomen

Eveline de Swart, Resolving contradicting binets and finding similarities in networks

Erica van der Sar, Constructing Evolutionary Supernetworks from Binets

Laura Jetten, Characterising tree-based phylogenetic networks